Prime editing (another way to edit genes)

Ғылым және технология

So, I don't know why I hadn't already made a video on gene editing as it is a topic I know quite a bit about, but anyhow, there is one now :D. This video will look at the new technology to perform precise genome editing, prime editing and will look at how the method works and how it differs from the canonical CRISPR-Cas9 system.
ASheekeyScience Blog; asheekeyscienceblog.com/2017/...
NATURE PUBLICATION: www.nature.com/articles/s4158... / Anzalone, A. V. et al. Nature doi.org/10.1038/s41586-019-17... (2019)
Liu's papers; liugroup.us/publications/

Пікірлер: 60

  • @DeenyCat
    @DeenyCat2 жыл бұрын

    Starting at a new lab without the best background in genetics and this was soooo helpful! thank you !

  • @wusam5764
    @wusam57644 жыл бұрын

    I like how you give really great, thorough introduction and that you explain the paper really clearly with many visual aids. :)

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you very much for your kind review!

  • @chun-yinghuang8627
    @chun-yinghuang86274 жыл бұрын

    Thank you for making such a great video! I’m working on gene editing and this video really helps!

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you very much! 😊

  • @inquisitivebiologist2442
    @inquisitivebiologist24424 жыл бұрын

    This was an actually amazing video explaining Prime editing. Thanks a lot, you are great!

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you very much!! 😊

  • @inquisitivebiologist2442

    @inquisitivebiologist2442

    4 жыл бұрын

    @@TheSheekeyScienceShow You really made this complicating thing easy to understand for me. Thanks a lot. Writing a research paper on genome editing, and I'm using Prime as the Future! Very interesting and promising!

  • @BillKonstantakos
    @BillKonstantakos4 жыл бұрын

    Great review! Also worth mentioning that they designed sgRNAs that match only the edited strand to minimize double-strand DNA breaks (PE3b); this way nicking of the non-edited strand occurs after edited strand flap resolution.

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you!

  • @videofancrazy18
    @videofancrazy184 жыл бұрын

    Really well explained, and you posited all the questions we need to ask about this technology. Your sense of humour certainly doesn't hurt lol.

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you! And glad to hear you enjoy the humour 😊

  • @adeelmehmood8093

    @adeelmehmood8093

    2 жыл бұрын

    @@TheSheekeyScienceShow can be editing polycystics kidney disease which involved faulty genes their names pkd1 and pkd2 thanks

  • @fazelamirvahedi9911
    @fazelamirvahedi99117 ай бұрын

    That was really nice and well-explained. Thank you for sharing your knowledge and skill. Please make more videos like this.

  • @sanja4890
    @sanja48903 жыл бұрын

    Super good explanation! Thanks for the video and the references :)

  • @kiara_l8732
    @kiara_l87323 жыл бұрын

    Thank you so much for making this! A quick question, is the primer binding site in the linker region between the cas9 and the reverse transcriptase?

  • @aoihana1042
    @aoihana10422 ай бұрын

    Excellent and easy to follow summary🎉

  • @BFS4321
    @BFS43214 жыл бұрын

    This is cool, thank you Eleanor, for the animated cartoon video, which helps a lot. BTW, what program you used for annotation and drawing?

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thanks! I use the apps under the "Windows Ink Workspace" that came with my laptop! Hope that helps

  • @tgime1
    @tgime13 жыл бұрын

    Love this explanation!

  • @treewx
    @treewx2 жыл бұрын

    So, in Prime Editing, that Cas9 attaches to the Target Strand, but edits the Non-Target strand?

  • @bretcaro8478
    @bretcaro84784 жыл бұрын

    Great explanation!

  • @sheenasmith2195
    @sheenasmith21954 жыл бұрын

    Very nice summary-- thanks!

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you! 😊

  • @lilyz646
    @lilyz6464 жыл бұрын

    Very well explained!!! I loved it thank you very much! I think you might've mislabeled two 5’ ends on the pegRNA at around 9:12 minute mark?

  • @lilyz646

    @lilyz646

    4 жыл бұрын

    The singing that started shortly after in the background scared the ever loving Jesus out of me 😂😂😂✌️

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you and aha, yes indeed, well spotted!

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    @@lilyz646 Yes, i can imagine, think it was an owl...!

  • @shiyiyin3403
    @shiyiyin34032 ай бұрын

    4:36 , regarding base editing, ABE and CBE are now nickase based as of 2024, i did remember early on they were dcas9; Cas9n means N terminal fusion protein, can be confused with nCas9, nickase cas9 Great video!!!

  • @shroomwave9281
    @shroomwave92812 жыл бұрын

    Thank you for this video. I'll give you lots of credits in my presentation!

  • @karenmendez587
    @karenmendez5873 жыл бұрын

    Thank you so much for this video! it really helped. DO you have a protocol that you can share? Thanks again

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    3 жыл бұрын

    Thanks! I dont have a protocol, sorry!

  • @user-xe5wo6tn8u
    @user-xe5wo6tn8u Жыл бұрын

    Thank you so much. This was very helpful

  • @yangzhou8486
    @yangzhou84862 жыл бұрын

    Great great video!!!

  • @motaherhossain4491
    @motaherhossain44914 жыл бұрын

    Well explained. Could you please tell me which software did you use for the depiction of your video?

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thanks and 'Microsoft Whiteboard'

  • @motaherhossain4491

    @motaherhossain4491

    4 жыл бұрын

    @@TheSheekeyScienceShow I see. Thank you.

  • @Mohammadssalehi
    @Mohammadssalehi4 жыл бұрын

    "Ooh exciting" lol Great job!

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Haha, thank you!

  • @MrEstradaG
    @MrEstradaG4 жыл бұрын

    u got yourself a new subscriber

  • @brickmortar6965
    @brickmortar69653 жыл бұрын

    thx. Very helpful overview.

  • @MrsSolvinden
    @MrsSolvinden4 жыл бұрын

    I'm a student currently working on an essay based on the mentioned paper and randomly ended up watching this video. This was really helpful, perfectly explained and easy to understand. Thank you for your work! Not only for the great sum up but also for the critical point of view (like in Jonathan Wilde tweets). Ps: Could anyone share what's the previous cell paper he mentions?

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you for your feedback!! The paper he refers to is the Nature paper describing prime editing (you'll find the link in the description!). Let me know if you meant something else! 😊

  • @MrsSolvinden

    @MrsSolvinden

    4 жыл бұрын

    @@TheSheekeyScienceShow Thank you for the quick answer :) I meant the one he says they haven't cited. (Cell paper previous to the Nature one) I found it so I'll leave it here in case anyone else is interested! doi.org/10.1016/j.cell.2018.08.057

  • @zeminren6020
    @zeminren60204 жыл бұрын

    Great review

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you! 😊

  • @RadwanDerbala--
    @RadwanDerbala--4 жыл бұрын

    A pretty awesome video, no more no less

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you very much!

  • @sudipaich7617
    @sudipaich76173 жыл бұрын

    Mam crispr can delete genetic hyperpigmentation?

  • @shikhas425
    @shikhas4252 жыл бұрын

    I cannot stop laughing at the "ooh exciting" at 8:45. Also this video is super helpful :)

  • @basic48
    @basic483 жыл бұрын

    How was the word "Sheekey" derived?

  • @ahmetkara2330
    @ahmetkara23303 жыл бұрын

    wow! really helpful

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    3 жыл бұрын

    Thanks! 😊

  • @ShyCataclysm
    @ShyCataclysm4 жыл бұрын

    good job

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Thank you! 😊

  • @IsaacOLEG
    @IsaacOLEG4 жыл бұрын

    OSX or WINDOWS ?

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    Windows

  • @johanlauritsen
    @johanlauritsen4 жыл бұрын

    Why is SSBs "inefficient", your conlusion is the direct opposite of what other researchers say, namely that DSBs are inefficient, therefore SSBs er more efficient?

  • @TheSheekeyScienceShow

    @TheSheekeyScienceShow

    4 жыл бұрын

    The purpose of prime editing is to make gene editing safe and efficient. Using wild-type Cas9 that induces DSBs has been shown to efficient but is not safe. SSBs are much safer and use a mutated version of Cas9 that cuts one DNA strand. SSBs are quickly repaired by the cell which does not provide sufficient time & interaction for the integration of the sgRNA/Cas9/repair template complex, hence very low efficiency - this was the rationale behind the whole paper and design of prime editing. I have personally tested and directly compared the editing efficiencies of WT-Cas9 (DSBs) and H840A-Cas9 (SSB) and in my set up WT efficiency was ~20% whilst H840A was

  • @gregsmith6756
    @gregsmith67563 ай бұрын

    This is too complicated. I will stick with near PAM-less CRISPR, using HDR donor repair templates.

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