Polar Acidic and Basic Amino Acids
leah4sci.com/aminoacids presents: Amino Acids Part 3 - Polar Acid and Basic Amino Acids.
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This is video 3 in the MCAT amino acids tutorial video series. Learn why side chain groups make some amino acids polar neutral while others are charges acids or bases
Referenced in this video:
Acid/Base Series: leah4sci.com/acidbase
Aromaticity Tutorial: leah4sci.com/aromaticity-tuto...
Zwitterion Tutorial: leah4sci.com/amino-acid-charg...
Catch this entire video series along with my amino acid cheat sheet, tutorials and practice quiz on my website:
leah4sci.com/aminoacids
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Пікірлер: 28
thank you Leah! I've been studying these things for years but they never made any sense to me until you explained it. Bless your kind soul for sharing these videos for free
@Leah4sciMCAT
3 жыл бұрын
Awwww, you're so welcome!
Thank you for sharing your knowledge. I've been really having a hard time in my BioChem class. You helped a lot.
@Leah4sciMCAT
2 жыл бұрын
Happy to help!
At 4:28 you mentioned Cystine is not quite acidic or basic but at high enough conditions we do have an ionisable group, giving us an S minus which is hydrophilic. What is defined as high? High temperature? Thanks
@Leah4sciMCAT
5 жыл бұрын
pH conditions
hi leah! you said in the video that cysteine and threonine can be classified as nonpolar or polar/hydrophobic or hydrophilic. but what does the mcat classify this as? thanks!
@Leah4sciMCAT
3 ай бұрын
The MCAT won't ask a simple 'is this hydrophobic' type question. Instead they'll ask about the chemistry behind it, for example the chains ability to interact in a certain environment, or worse, how a mutation swapping a very reactive side chain for this one will impact its active site or similar
great videos!! you are awesome!
@Leah4sciMCAT
7 жыл бұрын
Thank you
7:00 you say that tyrosine is overall hydrophobic (nonpolar ) then how come it’s included in this video of polar aa-sorry im just co fused
@Leah4sciMCAT
5 жыл бұрын
There's no hard line between hydrophobic and hyrophilic. Some can be in between where they are very very mildly soluble in water. Tyrosine is mostly hydrophobic due to the benzene ring but is slightly more agreeable in water than say phenylalanine due to having an OH group. If Tyrosine is deprotonated the negative charge makes it more water soluble
Are all the nitrogen atoms in Arginine essentially sp2 hybridized? And without resonance, would those nitrogens considered sp3?
@Leah4sciMCAT
3 жыл бұрын
Great question! Yes, because of resonance, all the nitrogen atoms in arginine are considered to be sp2 hybridized. Without consideration of that resonance, just going on the number of bonding and non-bonding electrons, two of those nitrogens would be sp3.
You mentioned that histidine has a PKa of 6 but it is a basic amino acid!
@Leah4sciMCAT
5 жыл бұрын
it's not about the pH as much as what happens to the proton. If the amino acid GRABS a proton it's acting as a base. If it donates a proton it's acting as an acid. Histidine grabs a proton. see this for review: leah4sci.com/arrhenius-bronsted-lowry-and-lewis-acids-and-bases-in-organic-chemistry/
Why the -COOH of cystein is more acidic than serin, since O is more electronegative than S ??
@Leah4sciMCAT
6 жыл бұрын
at which specific point in the video?
@mhtsos127
6 жыл бұрын
Leah4sciMCAT it is not in the video.It's a general question. I think its because of the hydrogen bonds endomolecular in serine but i am not sure this is the correct answer
bless you
@Leah4sciMCAT
7 ай бұрын
Awww thanks so much!
You're a boss.
@Leah4sciMCAT
4 жыл бұрын
You know it!
I think of it as aspardick acid and that gives me the D XD awesome vid btw
@garretjcoleman
4 жыл бұрын
Not sure she meant it that way but that's what I heard too. Even had to rewind to make sure that's what she said lol.
@warpath7985
4 жыл бұрын
I just heard it and was laughing to myself. Came to the comments to see if anyone else noticed lol.
@Leah4sciMCAT
7 ай бұрын
the funnier, weirder or dirtier the mnemonic, the more likely you are to remember something
@Leah4sciMCAT
7 ай бұрын
Yup, that IS what I said 😉