Parsimony

Biol 181 Lecture on how to use parsimony to evaluate phylogenetic trees.

Пікірлер: 58

  • @Anthony-dy2cv
    @Anthony-dy2cv2 жыл бұрын

    GOD BLESS YOUR SOUL. I was searching everywhere for a video that could explain this but they were either too hard to understand or too high level for me to comprehend. But this was incredibly straightforward and motivating. Ma'am you are an amazing teacher.

  • @joshgialis2844
    @joshgialis28445 жыл бұрын

    Very informative video! Thank you for the upload Dr. Claire.

  • @tilakdhoble2245
    @tilakdhoble22455 жыл бұрын

    You are a Great Teacher...!! Thank you so much for this...!

  • @mafnoor
    @mafnoor3 ай бұрын

    Perfect-- just the supplement I needed for my class-- thank you!

  • @mattashley1385
    @mattashley13853 жыл бұрын

    Incredible video, you made it so clear! Thank you!

  • @jessicalv6442
    @jessicalv64427 ай бұрын

    Amazingly clear!!!!! Thanks a LOT! Campbell biology didn't do the explanation better than you :) You're amazing!

  • @nupatowoch3063
    @nupatowoch30632 жыл бұрын

    Now here is an insight one.. Appreciate your hard work

  • @nobinrm
    @nobinrm3 жыл бұрын

    This is so beautiful. thank u for such a great video.

  • @Cinderthebeaver
    @Cinderthebeaver8 ай бұрын

    Thank you ! 10 minutes before my test and I understood the tree but not the dna sequence matchin it ! ❤

  • @chandamitagoswami7745
    @chandamitagoswami77454 жыл бұрын

    Thankyou for the simplest explanation.

  • @sarahmartinez1021
    @sarahmartinez10216 жыл бұрын

    you're a great teacher!

  • @anwesasaha8321
    @anwesasaha83214 ай бұрын

    This is so beautifully explained, thank you ma'am.

  • @siddhirao8328
    @siddhirao83285 жыл бұрын

    Wow I easily understood it thank you so much !

  • @svenakin777
    @svenakin7774 жыл бұрын

    Great explanation, thank you!

  • @kenmagee8690
    @kenmagee86904 жыл бұрын

    Thank you so much !! Great explanation !!

  • @ameerrifai4408
    @ameerrifai4408 Жыл бұрын

    thank you Dr. Claire

  • @Jessica-zs7be
    @Jessica-zs7be4 жыл бұрын

    Now I can explain better to students, thank you

  • @soakable4500
    @soakable45002 жыл бұрын

    hi im an ap bio student, and you actually made sense of this.

  • @JVishGenX
    @JVishGenX3 жыл бұрын

    Best explanation. Thank you so much :D :D :D

  • @gautamkannan1909
    @gautamkannan19093 жыл бұрын

    Excellent explanation !!

  • @tatianaayala-delamatta5124
    @tatianaayala-delamatta51243 жыл бұрын

    I usually don't have issues with biology, but this stumped me in my lab. You have single-handedly saved me! Thank you!

  • @aruntheeban1
    @aruntheeban1 Жыл бұрын

    Very well explained!!!

  • @user-hi4wh4ye5x
    @user-hi4wh4ye5x4 ай бұрын

    Amazing job, Thanks

  • @francosantin1636
    @francosantin16365 жыл бұрын

    Very clear explanation :)

  • @zeynepkurt2801
    @zeynepkurt28016 жыл бұрын

    Superb !!!

  • @mileycyrus99able
    @mileycyrus99able3 жыл бұрын

    thank you so much for this.

  • @BalthazarUhsus
    @BalthazarUhsus2 жыл бұрын

    great video!

  • @MJ-ye7dd
    @MJ-ye7dd2 жыл бұрын

    This is the best👌

  • @tallulahbelle788
    @tallulahbelle7886 жыл бұрын

    hey! This might seem like a silly question but when you are talking about the ancestral state, how can you tell what that is without having a prior understanding as to which of the species have evolved most recently? thank you!

  • @dr.clairesays5104

    @dr.clairesays5104

    6 жыл бұрын

    It's actually not a silly question at all. We often assume that the outgroup shows the ancestral trait, however, this is not a very good assumption, because of course the outgroup has also continued to evolve since it separated from the ingroup. Sometimes you can use the fossil record to determine the ancestral trait for bony features. I've simplified the building of phylogenetic trees here considerably for an introductory class, but it actually quite complicated. In reality, it usually involves large data sets, complex statistical models, and very fast computers.

  • @anirbanbanerjee9482
    @anirbanbanerjee94826 жыл бұрын

    helpful for basic idea

  • @nadlinjustin8850
    @nadlinjustin88506 жыл бұрын

    Thanks for explanation, but would like anther lecture on how to Generate a parsimony network in TCS software.

  • @hassannaser7112
    @hassannaser7112 Жыл бұрын

    than you ,, from Syria

  • @aoifecartwright9915
    @aoifecartwright9915 Жыл бұрын

    hi, if there was gaps in the sequence, could a site still be considered informative?

  • @ayaqz3144
    @ayaqz31443 жыл бұрын

    thank you so much

  • @8nansky528
    @8nansky5282 жыл бұрын

    I ADORE READING

  • @mayurbiotech1657
    @mayurbiotech16575 жыл бұрын

    Thnks mam, the sequence just next to the parsim informative sequence consisting of CCTT is also informative right?

  • @dr.clairesays5104

    @dr.clairesays5104

    5 жыл бұрын

    Yes, that would also be an informative site. In a real world situation, you combine data from multiple informative sites to choose the most parsimonious tree.

  • @archasvityagi9997
    @archasvityagi99973 жыл бұрын

    DR. u have explained well. What about character weight when we have large no of species with their maximum available characters. I am trying with thirty morphological characters of 45 species using PAUP.

  • @dr.clairesays5104

    @dr.clairesays5104

    2 жыл бұрын

    Hi Archasvi! Sorry I didn't get back to you sooner. I'm actually not a taxonomist and I don't run analyses like the one you are describing in my research, so I am afraid I can't help you. I hope you were able to find someone to help you!

  • @tarahclue6737
    @tarahclue67372 жыл бұрын

    Thank you

  • @mohitbhardwaj5430
    @mohitbhardwaj5430 Жыл бұрын

    Hello Miss! Please explain the Neighborhood joining method or maximum likelihood method

  • @mianaman2842
    @mianaman28424 жыл бұрын

    thanks

  • @abdulkader7104
    @abdulkader71042 жыл бұрын

    min 2:30 orangutangs are the out group se we assume that they have the ancestral trait, and then we can look for shared derived traits within the in group

  • @aarons.1349
    @aarons.13493 жыл бұрын

    Can I choose only 1 informative site to make the tree, even tho there are multiple informative sites I can choose from??

  • @dr.clairesays5104

    @dr.clairesays5104

    3 жыл бұрын

    In the real world you would use many, possibly hundreds of informative sites. The more sites agree with your proposed tree, the more confident you become in the tree. A single site does not provide a lot of support for a particular tree. Remember, all trees represent hypothesized relationships between taxa and we use all available data to provide support for the various hypotheses.

  • @nancycamacho274
    @nancycamacho2744 жыл бұрын

    So if the sequences was GGAT would that be considered Parsimony Informative?

  • @dr.clairesays5104

    @dr.clairesays5104

    4 жыл бұрын

    It depends on what the ancestral trait is. If the ancestral trait is A or T, then that data would indicate that the two species with G are more closely related. If the ancestral trait is G, then that would be non informative.

  • @akr5863
    @akr58635 жыл бұрын

    Thank You....From India

  • @mousumikhatun2002
    @mousumikhatun20025 жыл бұрын

    Thank you... From India 🇮🇳

  • @wherearetgepoank1117
    @wherearetgepoank11172 жыл бұрын

    You furgot to put Jesus in the tree. That going to be the raght one, tha one with Jesus in it. Yeah I’m totally kidding, that was an amazing video. You really took a complicated subject and explained it in a very parsimonious way. Kind a meta-and very brilliant. I wish you were my genetics teacher in college.

  • @Tchotch_ke
    @Tchotch_ke2 жыл бұрын

    In the third (G T G T) why is it not 3 but 2?

  • @dr.clairesays5104

    @dr.clairesays5104

    2 жыл бұрын

    The scenario I proposed was that there was a change from T to G in the ancestor of all the apes and then a switch back to T in the Gorilla lineage. Which is 2 evolutionary changes. You could also propose that there was a change from T to G in the human lineage and another in the chimpanzee lineage. Again, that's 2 evolutionary changes. I hope that helps!

  • @xuanlai6446
    @xuanlai64464 жыл бұрын

    Is that how u r supposed to read orangutan??

  • @niamcd6604
    @niamcd6604 Жыл бұрын

    EVOLUTION THEORY NEEDS URGENT UPDATES!!! YET, anyone in the academia is too scared to openly say that because of the eugenist people behind its crazy blind support for it.

  • @onikarutherford7021
    @onikarutherford70213 жыл бұрын

    I keep confusing this word with "persimmon" in my bio class 🤦‍♀️

  • @arifsalmani351
    @arifsalmani3516 жыл бұрын

    ARIF