Getting Started in JMP Genomics: Creating the EDF and Importing SAM and BAM Files

Тәжірибелік нұсқаулар және стиль

Learn to import SAM or BAM files into JMP Genomics, taking raw (but aligned) data files and creating appropriate count data files that can be used in further analyses within JMP Genomics.

Пікірлер: 3

  • @ruthmhummel
    @ruthmhummel5 жыл бұрын

    There are more instructions for using JMP Genomics in a series of blogs, which you can find at community.jmp.com/t5/tag/genomics/tg-p/board-id/jmper-cable.

  • @irinavalsova3268
    @irinavalsova32685 жыл бұрын

    I have txt file as experimental design file. How do I import it?

  • @ruthmhummel

    @ruthmhummel

    5 жыл бұрын

    You can go to File > Open from any JMP Genomics window and then select the .txt (or .csv or .xls, or many other data file types) to import it directly into JMP. Then make sure you have those required Array, File, and ColumnName columns and save the table as a .sas7bdat file.

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